WebIDQ workflow manager
Reliability meets high-quality data
WebIDQ streamlines metabolomics research with a complete workflow solution, from sample registration to statistical data analysis. Designed for the cloud, it offers intelligent project management, precise quantification, and innovative features like AI-driven automated peak picking and built-in metabolism indicators. WebIDQ is required to run biocrates kits and available in various subscription models.
All-in-one solution for metabolomics workflow
WebIDQ streamlines metabolomics research with a complete workflow solution, from sample registration to statistical data analysis. Designed for the cloud, WebIDQ offers intelligent project management, precise quantification, and innovative features like AI-driven automated peak picking and built-in metabolism indicators. WebIDQ is required to run biocrates kits and available in various subscription models*.
Your benefits
Advantage of the cloud
- Worry-free environment – Automated updates and secure backups
- Data security – Compliant with privacy laws to protect data
- Complete control – FAIR-compliant with full data ownership
Ease of use
- Intuitive interface – Guided workflows for efficient use
- Project management – Easy sample registration and plate layout customization
- Visualization tools – Performance evaluation and quality monitoring
Advanced workflow features
- AI-driven peak picking – Assisted identification, integration, and quantification
- MetaboINDICATOR – Calculates biologically relevant sums and ratios
- Statistical analysis – Perform descriptive statistics, ANOVA, and PCA
Integration into biocrates ecosystem
- Easy access – Available through mybiocrates portal
- User control – Organize users and control access rights
- Collaborative workflows – Share projects across users within an organization
Efficient standardized workflow
biocrates’ kits include years of experience in targeted metabolomics. The kits are ready-to-use and deliver quality-controlled and reproducible quantification of metabolites in biological samples by following a few steps only. WebIDQ is the companion software that guides users through the whole workflow, from sample registration to biological interpretation of the results.
Project and sample management
- Sample registration
- Plate layout customization
- Worklist export to mass spectrometer

Quantification by AI-driven peak picking
- AI-driven peak identification and integration
- Straightforward peak checking with confidence indicator
- Automated metabolite quantification and validation
Validation and quality monitoring
- Performance check per plate and across plates
- Visualization of accuracies, CVs and retention times
- Tailored filters to highlight metabolite detectability
MetaboINDICATOR and statistics
- Data cleaning, imputation, and normalization
- Calculation of sums and ratios with biological relevance
- Descriptive statistics, ANOVA and PCA
WebIDQ tips, tricks and magic

Bishu Niederbacher, Ph.D.
Scientist | Application Support
biocrates life sciences, Innsbruck, Austria
Join WebIDQ wizardry master Bishu Niederbacher, as she reveals expert tricks and spells for mastering the WebIDQ software.
- Import plate runs with ease – Discover Bishu’s essential tips for seamless plate run imports into WebIDQ.
- Master the monitoring tool – Learn the magic behind the monitoring tool in the quantification module for precise and efficient data management.
- Conquer LC integration – Unlock expert-level guidance on using the LC integration feature in the quantification module for optimal results.
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Subscription plans
WebIDQ
cloud
Basic
- biocrates kits data processing Full kit workflow management from sample registration through data processing and exporting results
- Project management Organize projects and customize plate layouts
- Sample management Sample registration with custom group assignment for statistical analysis or metadata information for normalization (e.g. cell number)
- AI-driven peak picking Automated peak assignment and retention time adjustment based on quality control samples.
- Metabolite quantification Automated peak integration and calculation of metabolite concentrations based on internal standards and calibration curves
- MetaboINDICATOR Automatic calculation of predefined biologically relevant sums and ratios of metabolites for instant insights
- Automatic updates and backup Software is always up to date and data is secured with automatic backups
basic features (individuals)
WebIDQ
cloud
Core (bestseller)
- All Basic features Includes all features from Basic subscription
- Advanced integration settings Automated peak picking for individual chromatograms and retention time alignment allowing for streamlined data processing in cases of retention time shifts in individual metabolites
- Continuous quality monitoring Quality control tracking to monitor instrument performance over time and from plate to plate
- Customizable MetaboINDICATOR Create custom metabolite sums and ratios
- Expanded references to public metabolite databases In addition to HMDB and LipidMaps available in the Basic subscription, explore data using ChEBI, NCBI or PubChem databases
- Data cleaning and imputation Remove inconsistently detected metabolites based on percentage of group detectability and impute missing concentrations to strengthen statistical results.
- Descriptive statistics Calculate statistical characteristics and visualize data with box plots showing group variance.
advanced features (small teams)
WebIDQ
cloud
Core+
- All Core features Includes all features from Basic and Core subscriptions
- Custom-made quality controls Register custom quality control samples for use with validation and QC monitoring
- Customizable target values Add target values to custom QCs for accuracy monitoring and target value normalization
- Project team management Restrict project access to individual team members
- ANOVA and PCA Quickly translate findings to publication-ready visualizations with ANOVA and PCA to compare multiple groups and identify significant differences.
- Validation results approval Approve and lock results to prevent unwanted alterations after analysis completion
- Additional storage space Up to 50 GB of storage and 16 user slots.
 all in one (big teams)
WebIDQ
on-premises
Core
- All cloud Core features
- No automatic updates
- No automatic backups
- No database support
advanced features (small teams)
Metabolomics kit products
MxP Quant 500 XL
The largest combination of lipids and small molecules for quantitative metabolic profiling in a single kit
MxPÂ Quant 500
The comprehensive kit to study mechanisms of disease, nutrition, and the microbiome
AbsoluteIDQÂ p400 HR
The high performance, high resolution tool for targeted metabolomics profiling
AbsoluteIDQÂ p180
The gold standard in quantitative metabolomics for all fields of research
AbsoluteIDQÂ Bile acids
The benchmark solution to assess host-microbiota interaction
SMartIDQ alphaÂ
Efficient workflows for busy laboratories
Related assets
brochure
biocrates kit technology
pdf ~ 6 MB
download
brochure
MxP Quant 500 XL kit
pdf ~ 2 MB
download
brochure
biocrates services
pdf ~ 1,5 MB
download
brochure
WebIDQ software
pdf ~ 2 MB
download
Talk to an expert
biocrates life sciences gmbh
Eduard-Bodem-Gasse 8
6020 Innsbruck | AUSTRIA
Phone +43 512 579823
Fax +43 512 579823-329
biocrates inc.
26895 Aliso Creek Rd Ste B-426
Aliso Viejo, CA 92656-5301
Phone +1 774 424 8150
Operating hours: Mo – Fr | 9 am – 7 pm (EST)








